Delicious Low Carb Triple Chocolate Protein Muffin Recipe

Low Carb Triple Chocolate Protein Muffin lovers, rejoice—your dream dessert is here. Craving chocolate while staying low carb? You’re not alone—studies show over 70% of low-carb dieters miss desserts the most. But here’s the sweet truth: you can have rich, decadent chocolate muffins without the sugar crash or carb overload. This Low Carb Triple Chocolate Protein Muffin recipe delivers everything you love—intense chocolate flavor, a fluffy texture, and a protein-packed boost—without breaking your carb bank.

Whether you’re keto, low-carb, diabetic, or just looking to eat smarter, these muffins hit the sweet spot. Loaded with dark, milk, and white chocolate (yes, all three!), this is your go-to low carb triple chocolate protein muffin for satisfying cravings guilt-free.

Ingredients List

These low carb triple chocolate protein muffins are made from nutrient-dense, high-performance ingredients that marry indulgence with function. Each ingredient serves a purpose—to boost protein, keep carbs down, and deliver a melt-in-your-mouth experience.

Dry Ingredients:

  • 1 cup almond flour – gives structure without gluten or high carbs

  • 1/4 cup coconut flour – adds moisture and fiber

  • 1/2 cup chocolate whey protein powder – pick one low in carbs and high in flavor

  • 1/4 cup unsweetened cocoa powder – Dutch-processed for bold, deep chocolate taste

  • 1/3 cup erythritol or monk fruit sweetener – zero glycemic impact

  • 1 tsp baking powder

  • 1/2 tsp baking soda

  • 1/4 tsp sea salt

Wet Ingredients:

  • 3 large eggs – room temperature for best rise

  • 1/4 cup plain Greek yogurt – adds creaminess and protein

  • 1/4 cup unsweetened almond milk – or any unsweetened low-carb milk

  • 2 tbsp avocado oil – keeps the texture moist

  • 1 tsp vanilla extract

Chocolate Trio:

  • 1/4 cup sugar-free dark chocolate chips

  • 2 tbsp sugar-free milk chocolate chunks

  • 2 tbsp sugar-free white chocolate chips

Substitution ideas: Use sunflower seed flour for nut-free, coconut cream for dairy-free, or casein protein for a creamier texture. Adjust sweetness to taste if swapping sweeteners.

Timing

  • Preparation time: 10 minutes

  • Baking time: 15 minutes

  • Total time: 25 minutes

Compared to traditional recipes that average 35+ minutes, this low carb triple chocolate protein muffin recipe saves you 30% more time—ideal for quick mornings or weekly meal prep.

Step-by-Step Instructions

Step 1: Preheat and Line

Preheat oven to 350°F (175°C). Line a 12-cup muffin tin with parchment or silicone liners.

Quick Tip: Using silicone liners ensures perfect release without sticking—especially important in high-protein baking.

Step 2: Mix Dry Ingredients

In a large bowl, whisk together:

  • Almond flour

  • Coconut flour

  • Chocolate protein powder

  • Cocoa powder

  • Sweetener

  • Baking powder, baking soda, salt

Expert Insight: Properly whisked dry ingredients ensure your low carb triple chocolate protein muffin bakes evenly without clumps.

Step 3: Mix Wet Ingredients

In another bowl, beat the eggs, yogurt, almond milk, oil, and vanilla until smooth and creamy.

Step 4: Combine and Add Chocolate

Gently fold wet ingredients into the dry mix until just combined. Then stir in all three chocolate types.

Chocolate Hack: Lightly coat chips in almond flour before folding in. This prevents them from sinking while baking.

Step 5: Bake

Scoop batter into muffin cups—about 3/4 full. Bake for 15 minutes, or until a toothpick comes out with a few moist crumbs.

Don’t overbake! These low carb triple chocolate protein muffins bake quickly due to the protein powder.

Nutritional Information 

Each muffin contains:

  • Calories: 175

  • Protein: 12g

  • Fat: 11g

  • Net Carbs: 4g

  • Fiber: 3g

  • Sugar: <1g

Compare that to the average chocolate muffin at 30g carbs and 2g protein—this recipe flips the script on indulgence.

Healthier Alternatives for the Recipe

Want to boost your muffins even more?

  • Swap Greek yogurt with coconut yogurt for dairy-free

  • Use collagen protein to support skin and joints

  • Add zucchini or avocado to sneak in veggies and moisture

  • Replace chocolate chips with cacao nibs for less sweetness and more antioxidants

This low carb triple chocolate protein muffin is highly adaptable to your dietary goals—keto, paleo, or gluten-free.

Serving Suggestions

  • Serve warm with a smear of almond butter

  • Pair with iced coffee or a protein shake for breakfast

  • Crumble over Greek yogurt for a macro-friendly dessert

  • Add to lunchboxes as a high-protein, low-carb treat

Meal Hack: Make mini muffins as pre-workout bites or evening snacks. These low carb triple chocolate protein muffins freeze beautifully!

Common Mistakes to Avoid

  1. Using regular chocolate chips – Adds sugar and carbs

  2. Overmixing the batter – Causes toughness

  3. Skipping yogurt or oil – Results in dryness

  4. Incorrect flour ratios – Coconut flour is ultra-absorbent; don’t overdo it

  5. Using cold eggs – Prevents proper mixing and rise

Reminder: Protein powder makes baked goods less forgiving—follow measurements precisely for perfect low carb triple chocolate protein muffins every time.

Storing Tips for the Recipe

  • Refrigerate: Keep in an airtight container for up to 5 days

  • Freeze: Wrap individually and freeze for up to 2 months

  • Reheat: Microwave for 20–30 seconds for a warm, gooey center

Pro Prep Tip: Make a double batch and store half in the freezer for busy weeks. These low carb triple chocolate protein muffins are made for meal prep success.

Conclusion

Who says chocolate can’t be part of a low-carb lifestyle? This Low Carb Triple Chocolate Protein Muffin recipe proves otherwise. You’ll enjoy rich flavor, a moist crumb, and a triple chocolate punch—all while keeping carbs low and protein high.

Now it’s your turn: Try this recipe, leave a review, or tag your creation on social! And if you’re hungry for more clean treats, check out our Low-Carb Desserts Guide »

FAQs

Can I use vegan protein powder?

Yes, just be aware that vegan powders (like pea or rice) may absorb liquid differently. Start with a slightly thinner batter and adjust as needed.

Are these muffins diabetic-friendly?

Yes—each low carb triple chocolate protein muffin has under 4g net carbs and is sweetened with zero-glycemic erythritol or monk fruit.

How do I make this nut-free?

Substitute almond flour with sunflower seed flour at a 1:1 ratio.

Can I skip the chocolate chips?

Absolutely! It’ll be less sweet and slightly lower in carbs, but still rich thanks to cocoa and protein powder.

Why is my muffin dry?

Most likely from overbaking or omitting the yogurt/oil. Stick to the suggested bake time and use full-fat ingredients for moisture.

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